Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC23.58■■□□□ 1.37
RAPGEF3O95398 AC012618.1-201ENST00000461223 412 ntBASIC23.58■■□□□ 1.37
RAPGEF3O95398 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC23.58■■□□□ 1.37
RAPGEF3O95398 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RAPGEF3O95398 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RAPGEF3O95398 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC23.58■■□□□ 1.36
RAPGEF3O95398 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RAPGEF3O95398 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
RAPGEF3O95398 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC23.58■■□□□ 1.36
RAPGEF3O95398 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RAPGEF3O95398 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 AC148477.4-201ENST00000613430 1793 ntBASIC23.57■■□□□ 1.36
RAPGEF3O95398 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RAPGEF3O95398 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAPGEF3O95398 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 POLL-217ENST00000628479 1953 ntTSL 5 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 AL008707.1-201ENST00000422498 534 ntBASIC23.56■■□□□ 1.36
RAPGEF3O95398 POU5F1P6-201ENST00000466990 990 ntBASIC23.56■■□□□ 1.36
RAPGEF3O95398 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 AC022748.3-201ENST00000621828 275 ntBASIC23.56■■□□□ 1.36
RAPGEF3O95398 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAPGEF3O95398 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
RAPGEF3O95398 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 CMC1-204ENST00000423894 549 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 RN7SL736P-201ENST00000613111 269 ntBASIC23.55■■□□□ 1.36
RAPGEF3O95398 AC011491.1-203ENST00000637688 543 ntBASIC23.55■■□□□ 1.36
RAPGEF3O95398 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC23.55■■□□□ 1.36
RAPGEF3O95398 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAPGEF3O95398 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AC234782.1-201ENST00000451950 919 ntBASIC23.54■■□□□ 1.36
RAPGEF3O95398 CFL1-206ENST00000527344 962 ntTSL 2 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 PPY2P-201ENST00000582808 702 ntBASIC23.54■■□□□ 1.36
RAPGEF3O95398 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms