Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 AC026120.1-201ENST00000611536 926 ntBASIC16.18■□□□□ 0.18
VAPBO95292 SPDYE10P-202ENST00000612005 668 ntBASIC16.18■□□□□ 0.18
VAPBO95292 SPDYE8P-202ENST00000612377 668 ntBASIC16.18■□□□□ 0.18
VAPBO95292 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 C20orf181-201ENST00000623918 480 ntBASIC16.18■□□□□ 0.18
VAPBO95292 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
VAPBO95292 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 AP001282.1-201ENST00000531301 1499 ntBASIC16.17■□□□□ 0.18
VAPBO95292 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.17■□□□□ 0.18
VAPBO95292 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VAPBO95292 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.17■□□□□ 0.18
VAPBO95292 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.17■□□□□ 0.18
VAPBO95292 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 AC061975.2-201ENST00000581722 295 ntBASIC16.17■□□□□ 0.18
VAPBO95292 AC024267.1-201ENST00000582320 895 ntBASIC16.17■□□□□ 0.18
VAPBO95292 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
VAPBO95292 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
VAPBO95292 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VAPBO95292 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.16■□□□□ 0.18
VAPBO95292 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 AC142381.1-201ENST00000426099 345 ntBASIC16.16■□□□□ 0.18
VAPBO95292 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
VAPBO95292 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.16■□□□□ 0.18
VAPBO95292 AC079140.1-201ENST00000508039 487 ntBASIC16.16■□□□□ 0.18
VAPBO95292 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.16■□□□□ 0.18
VAPBO95292 MTDHP5-201ENST00000598980 586 ntBASIC16.16■□□□□ 0.18
VAPBO95292 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VAPBO95292 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VAPBO95292 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms