Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLSTN1O94985 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.88■□□□□ 0.45
CLSTN1O94985 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CLSTN1O94985 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLSTN1O94985 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CLSTN1O94985 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLSTN1O94985 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 HTR5BP-201ENST00000430851 1154 ntBASIC17.87■□□□□ 0.45
CLSTN1O94985 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLSTN1O94985 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CLSTN1O94985 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLSTN1O94985 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.87■□□□□ 0.45
CLSTN1O94985 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLSTN1O94985 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLSTN1O94985 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.86■□□□□ 0.45
CLSTN1O94985 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLSTN1O94985 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 MCCD1P2-201ENST00000423228 335 ntBASIC17.86■□□□□ 0.45
CLSTN1O94985 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.86■□□□□ 0.45
CLSTN1O94985 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLSTN1O94985 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.86■□□□□ 0.45
CLSTN1O94985 AC005829.1-201ENST00000570002 483 ntBASIC17.86■□□□□ 0.45
CLSTN1O94985 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.86■□□□□ 0.45
CLSTN1O94985 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CLSTN1O94985 C20orf181-201ENST00000623918 480 ntBASIC17.86■□□□□ 0.45
CLSTN1O94985 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLSTN1O94985 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLSTN1O94985 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CLSTN1O94985 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.86■□□□□ 0.45
CLSTN1O94985 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLSTN1O94985 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CLSTN1O94985 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms