Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.69■□□□□ 0.1
E2F3O00716 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 AC092850.2-201ENST00000623821 2697 ntBASIC15.69■□□□□ 0.1
E2F3O00716 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 FAM58CP-201ENST00000435741 640 ntBASIC15.69■□□□□ 0.1
E2F3O00716 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.69■□□□□ 0.1
E2F3O00716 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.69■□□□□ 0.1
E2F3O00716 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.69■□□□□ 0.1
E2F3O00716 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.69■□□□□ 0.1
E2F3O00716 AC061975.2-201ENST00000581722 295 ntBASIC15.69■□□□□ 0.1
E2F3O00716 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
E2F3O00716 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 SPTSSB-204ENST00000617024 1292 ntBASIC15.69■□□□□ 0.1
E2F3O00716 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.69■□□□□ 0.1
E2F3O00716 AC093028.1-201ENST00000622998 982 ntBASIC15.69■□□□□ 0.1
E2F3O00716 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.69■□□□□ 0.1
E2F3O00716 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 AL596257.1-201ENST00000641463 2694 ntBASIC15.69■□□□□ 0.1
E2F3O00716 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
E2F3O00716 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
E2F3O00716 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 MIR770-201ENST00000390219 98 ntBASIC15.68■□□□□ 0.1
E2F3O00716 TSEN15P1-201ENST00000423257 515 ntBASIC15.68■□□□□ 0.1
E2F3O00716 ADH5P3-201ENST00000433842 1137 ntBASIC15.68■□□□□ 0.1
E2F3O00716 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.68■□□□□ 0.1
E2F3O00716 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.68■□□□□ 0.1
E2F3O00716 AP000344.2-201ENST00000512987 629 ntBASIC15.68■□□□□ 0.1
E2F3O00716 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.68■□□□□ 0.1
E2F3O00716 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.68■□□□□ 0.1
E2F3O00716 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 AC092902.6-201ENST00000641783 218 ntBASIC15.68■□□□□ 0.1
E2F3O00716 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
E2F3O00716 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
E2F3O00716 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 CICP13-201ENST00000422015 2789 ntBASIC15.68■□□□□ 0.1
E2F3O00716 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
E2F3O00716 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 PPT1-215ENST00000641471 2368 ntBASIC15.68■□□□□ 0.1
E2F3O00716 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
E2F3O00716 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
E2F3O00716 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.67■□□□□ 0.1
E2F3O00716 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
E2F3O00716 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.67■□□□□ 0.1
E2F3O00716 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms