Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL21O00585 VDAC1P7-201ENST00000462417 847 ntBASIC14.05□□□□□ -0.16
CCL21O00585 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL21O00585 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL21O00585 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CCL21O00585 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL21O00585 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL21O00585 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL21O00585 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CCL21O00585 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL21O00585 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL21O00585 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCL21O00585 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.05□□□□□ -0.16
CCL21O00585 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 AC005915.1-201ENST00000624912 2018 ntBASIC14.05□□□□□ -0.16
CCL21O00585 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 AL592424.1-201ENST00000563624 1536 ntBASIC14.05□□□□□ -0.16
CCL21O00585 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL21O00585 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL21O00585 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL21O00585 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 FLJ16779-201ENST00000612722 7638 ntBASIC14.04□□□□□ -0.16
CCL21O00585 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL21O00585 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 KRT18P64-201ENST00000434946 1219 ntBASIC14.04□□□□□ -0.16
CCL21O00585 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL21O00585 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 AP001063.1-201ENST00000568332 529 ntBASIC14.04□□□□□ -0.16
CCL21O00585 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL21O00585 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL21O00585 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL21O00585 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL21O00585 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL21O00585 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL21O00585 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCL21O00585 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCL21O00585 PCDHB18P-201ENST00000524813 2368 ntBASIC14.03□□□□□ -0.16
CCL21O00585 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL21O00585 AC139713.2-201ENST00000641328 2723 ntBASIC14.03□□□□□ -0.16
CCL21O00585 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
CCL21O00585 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL21O00585 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCL21O00585 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
CCL21O00585 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL21O00585 AC012441.1-201ENST00000446669 685 ntBASIC14.03□□□□□ -0.16
CCL21O00585 AC093433.1-201ENST00000458048 571 ntBASIC14.03□□□□□ -0.16
CCL21O00585 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL21O00585 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL21O00585 SLED1-202ENST00000512051 380 ntBASIC14.03□□□□□ -0.16
CCL21O00585 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL21O00585 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL21O00585 CLUHP6-201ENST00000580789 941 ntBASIC14.03□□□□□ -0.16
CCL21O00585 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL21O00585 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL21O00585 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL21O00585 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL21O00585 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL21O00585 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms