Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM6-TRIM34B2RNG4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP005117.1-202ENST00000581724 1908 ntBASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC211486.1-202ENST00000416371 468 ntBASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC211476.1-201ENST00000503899 468 ntBASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AL513210.1-201ENST00000629608 234 ntBASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP3S2-216ENST00000617003 1561 ntBASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 FAM220BP-201ENST00000377689 816 ntBASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 HLA-H-201ENST00000383620 1096 ntBASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 TSPY26P-202ENST00000565928 3884 ntBASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 KRT18P32-201ENST00000424695 1287 ntBASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 FAM58DP-201ENST00000428076 619 ntBASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms