Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 AL805961.1-202ENST00000641562 540 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 TMBIM7P-203ENST00000641617 1718 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 AL021920.2-201ENST00000624828 1351 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 AP002414.1-201ENST00000391405 1147 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 AC117500.6-201ENST00000624871 588 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 GRK6P1-201ENST00000400595 1711 ntBASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4B1Q9Y6B7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 AC020658.6-201ENST00000623564 1870 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 FLJ16779-201ENST00000612722 7638 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 RPL13AP23-201ENST00000480739 586 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 RPS15P9-201ENST00000494093 319 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms