Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SPDYE11-202ENST00000450699 704 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 RNA5SP410-201ENST00000516285 106 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SPDYE9P-201ENST00000570642 692 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AC024267.1-201ENST00000582320 895 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SPDYE10P-202ENST00000612005 668 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SPDYE8P-202ENST00000612377 668 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 AC105250.1-201ENST00000509378 2057 ntBASIC18.34■□□□□ 0.53
CLIC4Q9Y696 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 RN7SL589P-201ENST00000481268 310 ntBASIC18.34■□□□□ 0.53
CLIC4Q9Y696 ALG1L5P-201ENST00000482043 771 ntBASIC18.34■□□□□ 0.53
CLIC4Q9Y696 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 C20orf181-201ENST00000623918 480 ntBASIC18.34■□□□□ 0.53
CLIC4Q9Y696 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLIC4Q9Y696 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.33■□□□□ 0.53
CLIC4Q9Y696 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC4Q9Y696 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 FAM220BP-201ENST00000377689 816 ntBASIC18.33■□□□□ 0.52
CLIC4Q9Y696 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 AC004832.2-201ENST00000426397 482 ntBASIC18.33■□□□□ 0.52
CLIC4Q9Y696 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 TIMM8BP1-201ENST00000452384 211 ntBASIC18.33■□□□□ 0.52
CLIC4Q9Y696 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 AC090616.6-203ENST00000579186 1945 ntBASIC18.33■□□□□ 0.52
CLIC4Q9Y696 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC4Q9Y696 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms