Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 LINC02447-202ENST00000501888 2146 ntBASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 MRPS18AP1-201ENST00000414458 589 ntBASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 AC241585.1-201ENST00000433527 519 ntBASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 AL008721.1-201ENST00000609964 604 ntBASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB1Q9Y5F3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 AC142381.1-201ENST00000426099 345 ntBASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB1Q9Y5F3 FER1L4-210ENST00000615531 5998 ntBASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 MIR346-201ENST00000362234 95 ntBASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AL662799.1-202ENST00000614205 422 ntBASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 AC025048.6-201ENST00000634326 1161 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms