Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AC092127.1-201ENST00000567093 3455 ntBASIC15.26■□□□□ 0.03
AP4S1Q9Y587 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AC233702.3-201ENST00000578656 1387 ntBASIC15.26■□□□□ 0.03
AP4S1Q9Y587 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AC005363.2-201ENST00000618631 242 ntBASIC15.26■□□□□ 0.03
AP4S1Q9Y587 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AF228730.7-201ENST00000641842 219 ntBASIC15.26■□□□□ 0.03
AP4S1Q9Y587 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.26■□□□□ 0.03
AP4S1Q9Y587 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP4S1Q9Y587 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.25■□□□□ 0.03
AP4S1Q9Y587 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP4S1Q9Y587 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms