Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC008894.3-201ENST00000624324 3103 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AL353779.1-201ENST00000434793 351 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AP005018.1-201ENST00000525475 301 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC025048.3-201ENST00000590609 569 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SRD5A3P1-201ENST00000603021 949 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AC005702.4-201ENST00000618393 416 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 AP001282.1-201ENST00000531301 1499 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00588Q9Y4M8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC092364.2-201ENST00000596710 2692 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AZGP1P1-201ENST00000411909 902 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC005034.1-201ENST00000426657 489 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 DFFBP1-201ENST00000433250 979 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC093004.1-201ENST00000508850 424 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC005225.4-201ENST00000557330 545 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC074044.1-201ENST00000609673 707 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC012645.4-201ENST00000610691 1061 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 AC004790.1-201ENST00000612686 536 ntBASIC10.98□□□□□ -0.65
LINC00588Q9Y4M8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms