Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 DOC2GP-202ENST00000514950 1163 ntBASIC16.92■□□□□ 0.3
CDH9Q9ULB4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 AC092337.1-201ENST00000568699 1129 ntBASIC16.92■□□□□ 0.3
CDH9Q9ULB4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH9Q9ULB4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AC069224.1-201ENST00000566372 1715 ntBASIC16.91■□□□□ 0.3
CDH9Q9ULB4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 COX20P2-201ENST00000452636 358 ntBASIC16.91■□□□□ 0.3
CDH9Q9ULB4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH9Q9ULB4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH9Q9ULB4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH9Q9ULB4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH9Q9ULB4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH9Q9ULB4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms