Protein–RNA interactions for Protein: Q9UHC6

CNTNAP2, Contactin-associated protein-like 2, humanhuman

Predictions only

Length 1,331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2Q9UHC6 AC134407.2-201ENST00000625089 1978 ntBASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 AL391005.1-201ENST00000623953 2435 ntBASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP2Q9UHC6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC093004.1-201ENST00000508850 424 ntBASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC074044.1-201ENST00000609673 707 ntBASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC026691.1-201ENST00000602502 2017 ntBASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP2Q9UHC6 AC087499.6-201ENST00000411576 835 ntBASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 DOC2GP-202ENST00000514950 1163 ntBASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 API5-211ENST00000534695 560 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP2Q9UHC6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 AC004461.2-201ENST00000629517 803 ntBASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP2Q9UHC6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms