Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 INE1-201ENST00000456273 945 ntBASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 AC093726.1-201ENST00000608064 963 ntBASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 IGHV3-72-202ENST00000621503 303 ntBASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 AL607033.1-201ENST00000623900 1599 ntBASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHPF2Q9P2E5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AC098614.1-201ENST00000368528 745 ntBASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 AC018695.7-201ENST00000624587 2492 ntBASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHPF2Q9P2E5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 CLK3P2-201ENST00000427566 1453 ntBASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 AP006294.1-201ENST00000415407 339 ntBASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CHPF2Q9P2E5 CDC14C-201ENST00000428251 1719 ntBASIC20.27■□□□□ 0.83
CHPF2Q9P2E5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHPF2Q9P2E5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CHPF2Q9P2E5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.27■□□□□ 0.83
CHPF2Q9P2E5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHPF2Q9P2E5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AC099398.1-201ENST00000567919 2776 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 RRP7BP-205ENST00000566851 833 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AC132938.2-201ENST00000579188 680 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 AL591163.1-201ENST00000641757 987 ntBASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.26■□□□□ 0.83
CHPF2Q9P2E5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms