Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 AL513210.1-201ENST00000629608 234 ntBASIC16.07■□□□□ 0.16
MRM3Q9HC36 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRM3Q9HC36 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MRM3Q9HC36 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 KRT8P37-201ENST00000451609 1420 ntBASIC16.06■□□□□ 0.16
MRM3Q9HC36 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 CEND1P1-201ENST00000451006 455 ntBASIC16.06■□□□□ 0.16
MRM3Q9HC36 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 MIR4313-201ENST00000580760 101 ntBASIC16.06■□□□□ 0.16
MRM3Q9HC36 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MRM3Q9HC36 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRM3Q9HC36 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 SSR4P1-203ENST00000599569 2260 ntBASIC16.05■□□□□ 0.16
MRM3Q9HC36 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AC092183.1-201ENST00000469884 875 ntBASIC16.05■□□□□ 0.16
MRM3Q9HC36 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 AL450472.2-201ENST00000603663 1156 ntBASIC16.05■□□□□ 0.16
MRM3Q9HC36 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms