Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SND1-IT1Q9HBX3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CICP13-201ENST00000422015 2789 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 POM121L3P-201ENST00000419331 1163 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TSSC2-201ENST00000450217 709 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TOB2P1-201ENST00000469761 992 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 DUX4L26-201ENST00000489078 1255 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 MIR4492-201ENST00000581627 80 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 AC007292.2-201ENST00000593524 1812 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 NCF1C-201ENST00000438382 1427 ntBASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SND1-IT1Q9HBX3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms