Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 TFAMP1-201ENST00000412727 736 ntBASIC16.57■□□□□ 0.24
USP29Q9HBJ7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 FAM86GP-201ENST00000448322 971 ntBASIC16.57■□□□□ 0.24
USP29Q9HBJ7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 AL135744.1-201ENST00000565098 629 ntBASIC16.57■□□□□ 0.24
USP29Q9HBJ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 AP003680.1-201ENST00000598970 3660 ntBASIC16.57■□□□□ 0.24
USP29Q9HBJ7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 AC134407.2-201ENST00000625089 1978 ntBASIC16.57■□□□□ 0.24
USP29Q9HBJ7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP29Q9HBJ7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AP001282.1-201ENST00000531301 1499 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AL627223.1-201ENST00000416693 442 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SPDYE11-202ENST00000450699 704 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC105233.2-201ENST00000523697 349 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AF228730.5-201ENST00000530288 346 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC243562.1-201ENST00000560672 389 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SPDYE9P-201ENST00000570642 692 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC027307.2-201ENST00000591252 911 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SPDYE10P-202ENST00000612005 668 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SPDYE8P-202ENST00000612377 668 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 AC008267.7-201ENST00000624570 1194 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.56■□□□□ 0.24
USP29Q9HBJ7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP29Q9HBJ7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AC142381.1-201ENST00000426099 345 ntBASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 TIMM8BP1-201ENST00000452384 211 ntBASIC16.55■□□□□ 0.24
USP29Q9HBJ7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.55■□□□□ 0.24
USP29Q9HBJ7 LINC01225-203ENST00000563550 1244 ntBASIC16.55■□□□□ 0.24
USP29Q9HBJ7 AC093512.1-201ENST00000617969 520 ntBASIC16.55■□□□□ 0.24
USP29Q9HBJ7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms