Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 CICP13-201ENST00000422015 2789 ntBASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 SPDYE7P-202ENST00000420373 878 ntBASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 HNRNPUP1-201ENST00000554987 333 ntBASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 MIR4453-201ENST00000584019 89 ntBASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 AC022532.1-201ENST00000624563 1728 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 AZGP1P1-201ENST00000411909 902 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 HIST3H2BA-201ENST00000436555 524 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 AC069262.1-201ENST00000539058 672 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 CROCCP1-201ENST00000426910 5675 ntBASIC17.92■□□□□ 0.46
CCSER1Q9C0I3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AC092384.3-202ENST00000564646 2873 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AC092850.2-201ENST00000623821 2697 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AC105250.1-201ENST00000509378 2057 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 FO393414.2-201ENST00000405153 598 ntBASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.91■□□□□ 0.46
CCSER1Q9C0I3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms