Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 AFG3L1P-217ENST00000557444 2447 ntBASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 BNIP3P1-202ENST00000550043 1585 ntBASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 OFD1P15Y-201ENST00000411536 1392 ntBASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-3Q9BYR6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC007952.6-201ENST00000573168 2673 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC003957.1-201ENST00000625108 2673 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC131009.4-201ENST00000624048 1740 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC108024.1-201ENST00000626286 1721 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 QRSL1P1-201ENST00000400977 1540 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL121657.1-201ENST00000327215 531 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL157823.1-201ENST00000403727 628 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL358178.1-201ENST00000407698 397 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 EEF1B2P8-201ENST00000414101 671 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 OR4K6P-201ENST00000416478 897 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 OR8C1P-201ENST00000427511 925 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 OR52J2P-201ENST00000427973 939 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ST13P19-201ENST00000442505 1124 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 GDI2P2-201ENST00000445131 608 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC044797.1-201ENST00000445744 679 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CECR9-201ENST00000453421 199 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 Z95152.1-201ENST00000453556 656 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC010301.1-201ENST00000473936 355 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC006499.4-201ENST00000510947 694 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC093752.1-206ENST00000511823 336 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 HMGB1P41-201ENST00000520234 440 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL512310.6-201ENST00000550646 1175 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 APEX1-214ENST00000557054 888 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC090695.1-201ENST00000561269 1222 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms