Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 AC008735.5-201ENST00000623544 497 ntBASIC12.27□□□□□ -0.45
VGLL1Q99990 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
VGLL1Q99990 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.27□□□□□ -0.45
VGLL1Q99990 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.27□□□□□ -0.45
VGLL1Q99990 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 AC092919.2-201ENST00000623631 1645 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 RNU1-129P-201ENST00000384064 167 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.26□□□□□ -0.45
VGLL1Q99990 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.26□□□□□ -0.45
VGLL1Q99990 OR7E47P-204ENST00000575924 449 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 U1.21-201ENST00000580816 167 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.26□□□□□ -0.45
VGLL1Q99990 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.26□□□□□ -0.45
VGLL1Q99990 ACTL9-202ENST00000612068 1252 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 AC004790.2-201ENST00000623588 572 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.26□□□□□ -0.45
VGLL1Q99990 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 CICP13-201ENST00000422015 2789 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 AP002414.3-201ENST00000589352 1468 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VGLL1Q99990 AL365209.1-201ENST00000624418 6473 ntBASIC12.26□□□□□ -0.45
VGLL1Q99990 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.26□□□□□ -0.45
VGLL1Q99990 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms