Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.85■□□□□ 0.93
ABCA3Q99758 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.85■□□□□ 0.93
ABCA3Q99758 PDIA3P2-201ENST00000428073 158 ntBASIC20.85■□□□□ 0.93
ABCA3Q99758 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.85■□□□□ 0.93
ABCA3Q99758 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCA3Q99758 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCA3Q99758 CU633904.3-201ENST00000624042 1029 ntBASIC20.85■□□□□ 0.93
ABCA3Q99758 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCA3Q99758 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCA3Q99758 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.85■□□□□ 0.93
ABCA3Q99758 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCA3Q99758 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ABCA3Q99758 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ABCA3Q99758 AL645608.8-201ENST00000606034 2086 ntBASIC20.84■□□□□ 0.93
ABCA3Q99758 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.84■□□□□ 0.93
ABCA3Q99758 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
ABCA3Q99758 AL627389.1-201ENST00000413508 1182 ntBASIC20.84■□□□□ 0.93
ABCA3Q99758 MAGEA5-201ENST00000446757 942 ntBASIC20.84■□□□□ 0.93
ABCA3Q99758 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.84■□□□□ 0.93
ABCA3Q99758 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
ABCA3Q99758 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.84■□□□□ 0.93
ABCA3Q99758 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.84■□□□□ 0.93
ABCA3Q99758 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ABCA3Q99758 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.84■□□□□ 0.93
ABCA3Q99758 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.84■□□□□ 0.93
ABCA3Q99758 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA3Q99758 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA3Q99758 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA3Q99758 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.83■□□□□ 0.93
ABCA3Q99758 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ABCA3Q99758 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ABCA3Q99758 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.83■□□□□ 0.92
ABCA3Q99758 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.83■□□□□ 0.92
ABCA3Q99758 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ABCA3Q99758 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ABCA3Q99758 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC20.83■□□□□ 0.92
ABCA3Q99758 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.83■□□□□ 0.92
ABCA3Q99758 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.83■□□□□ 0.92
ABCA3Q99758 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ABCA3Q99758 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ABCA3Q99758 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ABCA3Q99758 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ABCA3Q99758 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.82■□□□□ 0.92
ABCA3Q99758 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.82■□□□□ 0.92
ABCA3Q99758 COX5BP1-201ENST00000507622 393 ntBASIC20.82■□□□□ 0.92
ABCA3Q99758 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.82■□□□□ 0.92
ABCA3Q99758 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.82■□□□□ 0.92
ABCA3Q99758 MIR7845-201ENST00000618396 99 ntBASIC20.82■□□□□ 0.92
ABCA3Q99758 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.82■□□□□ 0.92
ABCA3Q99758 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ABCA3Q99758 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ABCA3Q99758 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms