Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.03
COL21A1Q96P44 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 AL136379.1-201ENST00000623471 2642 ntBASIC15.27■□□□□ 0.03
COL21A1Q96P44 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.27■□□□□ 0.03
COL21A1Q96P44 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 AC016027.1-202ENST00000607927 1699 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 AL671277.1-201ENST00000429656 993 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 AC112482.1-201ENST00000492080 688 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 RARRES2P8-201ENST00000566335 367 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 AC023511.2-201ENST00000618803 211 ntBASIC15.26■□□□□ 0.03
COL21A1Q96P44 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL21A1Q96P44 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
COL21A1Q96P44 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ELL2P1-201ENST00000413990 1906 ntBASIC15.25■□□□□ 0.03
COL21A1Q96P44 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 AL355306.1-201ENST00000415580 579 ntBASIC15.25■□□□□ 0.03
COL21A1Q96P44 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 CEND1P1-201ENST00000451006 455 ntBASIC15.25■□□□□ 0.03
COL21A1Q96P44 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms