Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAPGEF4Q8WZA2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 FAM21FP-201ENST00000426241 1131 ntBASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 AC007551.1-201ENST00000457394 519 ntBASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RAPGEF4Q8WZA2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 AC092933.1-201ENST00000393644 945 ntBASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 BAATP1-201ENST00000412284 1225 ntBASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 AP000812.2-201ENST00000538934 718 ntBASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 MIR6869-201ENST00000619434 62 ntBASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF4Q8WZA2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 BRWD1P1-201ENST00000401091 371 ntBASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms