Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AC108073.2-201ENST00000464002 357 ntBASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AC002347.1-201ENST00000569543 541 ntBASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 AL078644.1-201ENST00000609881 752 ntBASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC01561Q8N1V8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
LINC01561Q8N1V8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AKR1C7P-201ENST00000305623 895 ntBASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 RPS2P1-201ENST00000434010 821 ntBASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01561Q8N1V8 AC093458.2-201ENST00000623150 629 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms