Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC020916.1-201ENST00000587762 1774 ntBASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCN4BQ8IWT1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 BTBD7P1-201ENST00000447253 1453 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 PIN1P1-201ENST00000412108 996 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC015922.1-201ENST00000421102 1152 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 GNAQP1-201ENST00000444815 1067 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 SDHAP3-202ENST00000515467 728 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 ZNF890P-202ENST00000530367 1156 ntBASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCN4BQ8IWT1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 HAUS4P1-201ENST00000406739 1145 ntBASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SPDYE18-201ENST00000510091 1050 ntBASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN4BQ8IWT1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms