Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 AC010507.1-201ENST00000633895 436 ntBASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC50Q8IVM0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 AC022532.1-201ENST00000624563 1728 ntBASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 AL365209.1-201ENST00000624418 6473 ntBASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC50Q8IVM0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 AP002414.2-201ENST00000591780 3365 ntBASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 HCG4B-203ENST00000450128 991 ntBASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC50Q8IVM0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms