Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MYCLP2-201ENST00000449268 967 ntBASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 AC123567.1-201ENST00000548294 1261 ntBASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 HNRNPUP1-201ENST00000554987 333 ntBASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
UBE3BQ7Z3V4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 CTBP2P3-201ENST00000585629 1255 ntBASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 AL450472.2-201ENST00000603663 1156 ntBASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 MIR8072-201ENST00000614241 80 ntBASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE3BQ7Z3V4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 MTHFR-217ENST00000641820 1569 ntBASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 AP006294.1-201ENST00000415407 339 ntBASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ELK1P1-201ENST00000485699 580 ntBASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 RARRES2P5-201ENST00000564013 466 ntBASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 AL391069.4-201ENST00000609583 481 ntBASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE3BQ7Z3V4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE3BQ7Z3V4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms