Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 AC013467.2-201ENST00000605472 835 ntBASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 AL513210.1-201ENST00000629608 234 ntBASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP1BQ7LBR1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 UXT-AS1-201ENST00000590504 1525 ntBASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AC004461.1-201ENST00000412461 403 ntBASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 METTL21AP1-201ENST00000438852 635 ntBASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 AC022145.2-201ENST00000598203 171 ntBASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 LINC00895-201ENST00000629028 1637 ntBASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP1BQ7LBR1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 MYO15B-237ENST00000642007 4893 ntBASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms