Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.15□□□□□ -0.31
VPS13CQ709C8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 C1QBPP1-201ENST00000400117 770 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC004987.2-201ENST00000395959 1148 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 TUBB8P12-201ENST00000308911 1335 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 TUBB7P-202ENST00000428444 1305 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 TUBB8P7-204ENST00000567960 1332 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC134915.1-201ENST00000426461 574 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 FGFR3P5-201ENST00000564496 886 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13CQ709C8 MIR7845-201ENST00000618396 99 ntBASIC13.14□□□□□ -0.31
VPS13CQ709C8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13CQ709C8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AHCYP2-201ENST00000430630 1300 ntBASIC13.13□□□□□ -0.31
VPS13CQ709C8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AC022137.2-201ENST00000503482 481 ntBASIC13.13□□□□□ -0.31
VPS13CQ709C8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 RHOXF1P1-202ENST00000635473 501 ntBASIC13.13□□□□□ -0.31
VPS13CQ709C8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VPS13CQ709C8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13CQ709C8 MPRIPP1-201ENST00000452433 1089 ntBASIC13.12□□□□□ -0.31
VPS13CQ709C8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13CQ709C8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
VPS13CQ709C8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13CQ709C8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms