Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 KRT8P37-201ENST00000451609 1420 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AC005052.1-201ENST00000625181 2492 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 AC022211.2-201ENST00000585075 2527 ntBASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 RPL13P2-201ENST00000440687 659 ntBASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 ATP5G2P4-201ENST00000442175 420 ntBASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 LINC01115-203ENST00000606068 577 ntBASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC62Q6P9F0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 AC092171.3-201ENST00000610122 2651 ntBASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC62Q6P9F0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 BNIP3P1-202ENST00000550043 1585 ntBASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 ME2P1-201ENST00000426028 1970 ntBASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AC074338.1-201ENST00000416825 156 ntBASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC62Q6P9F0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms