Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 WASH6P-202ENST00000359512 1437 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 ALG1L5P-201ENST00000482043 771 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 MIR3687-2-201ENST00000577708 61 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AC099522.2-201ENST00000607001 744 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 MIR3687-1-201ENST00000614492 61 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NIPAL3Q6P499 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 U82695.1-201ENST00000635752 1889 ntBASIC14.67□□□□□ -0.06
NIPAL3Q6P499 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 HTR5BP-201ENST00000430851 1154 ntBASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 RARRES2P8-201ENST00000566335 367 ntBASIC14.67□□□□□ -0.06
NIPAL3Q6P499 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC010327.4-202ENST00000591484 748 ntBASIC14.67□□□□□ -0.06
NIPAL3Q6P499 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC092902.6-201ENST00000641783 218 ntBASIC14.67□□□□□ -0.06
NIPAL3Q6P499 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms