Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SWSAP1Q6NVH7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 DFFBP1-201ENST00000433250 979 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 PHKG1P2-201ENST00000457537 863 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TPRX2P-201ENST00000535362 881 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TIMM17BP1-201ENST00000545713 516 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TP53TG3HP-202ENST00000569755 579 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 CHCHD2P3-201ENST00000603038 451 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 LINC01115-203ENST00000606068 577 ntBASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SWSAP1Q6NVH7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 TARDBPP1-201ENST00000442013 1203 ntBASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AC093004.1-201ENST00000508850 424 ntBASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AC005225.4-201ENST00000557330 545 ntBASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AC092337.1-201ENST00000568699 1129 ntBASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 MTHFR-217ENST00000641820 1569 ntBASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SWSAP1Q6NVH7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms