Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 MTND6P24-201ENST00000440466 518 ntBASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AC093028.1-201ENST00000622998 982 ntBASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AC046158.3-201ENST00000624947 2558 ntBASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 AL035456.1-201ENST00000456064 1369 ntBASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN20Q4JDL3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 SPDYE17-201ENST00000412399 783 ntBASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTPN20Q4JDL3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms