Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AC026471.1-201ENST00000564629 3026 ntBASIC17.42■□□□□ 0.38
CDC42EP1Q00587 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AL442647.2-201ENST00000429864 857 ntBASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 RPL13AP25-201ENST00000484130 612 ntBASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 MIR8072-201ENST00000614241 80 ntBASIC17.42■□□□□ 0.38
CDC42EP1Q00587 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42EP1Q00587 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 INE1-201ENST00000456273 945 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 GIMAP3P-201ENST00000495150 836 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 HNRNPUP1-201ENST00000554987 333 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AC106886.1-201ENST00000568660 600 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 CTBP2P3-201ENST00000585629 1255 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AC097359.3-201ENST00000603982 1210 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 AL158212.4-201ENST00000624062 1286 ntBASIC17.41■□□□□ 0.38
CDC42EP1Q00587 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42EP1Q00587 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 CLK3P2-201ENST00000427566 1453 ntBASIC17.4■□□□□ 0.38
CDC42EP1Q00587 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42EP1Q00587 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms