Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 LINC01101-201ENST00000622953 1884 ntBASIC14.53□□□□□ -0.08
CDK5Q00535 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.53□□□□□ -0.08
CDK5Q00535 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.53□□□□□ -0.08
CDK5Q00535 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDK5Q00535 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 IGLL3P-201ENST00000412472 434 ntBASIC14.53□□□□□ -0.08
CDK5Q00535 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 AC108751.1-201ENST00000490852 363 ntBASIC14.53□□□□□ -0.08
CDK5Q00535 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.53□□□□□ -0.08
CDK5Q00535 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDK5Q00535 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.53□□□□□ -0.08
CDK5Q00535 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.53□□□□□ -0.08
CDK5Q00535 AC009090.5-201ENST00000624886 2285 ntBASIC14.53□□□□□ -0.08
CDK5Q00535 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK5Q00535 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CDK5Q00535 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDK5Q00535 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDK5Q00535 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDK5Q00535 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDK5Q00535 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.52□□□□□ -0.08
CDK5Q00535 AC091951.1-201ENST00000512854 2465 ntBASIC14.52□□□□□ -0.08
CDK5Q00535 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.52□□□□□ -0.08
CDK5Q00535 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDK5Q00535 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK5Q00535 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDK5Q00535 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK5Q00535 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK5Q00535 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 VN2R19P-201ENST00000442399 1052 ntBASIC14.52□□□□□ -0.09
CDK5Q00535 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.52□□□□□ -0.09
CDK5Q00535 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK5Q00535 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.52□□□□□ -0.09
CDK5Q00535 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDK5Q00535 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK5Q00535 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 KRT8P44-201ENST00000441609 1350 ntBASIC14.51□□□□□ -0.09
CDK5Q00535 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK5Q00535 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK5Q00535 PMS2P7-201ENST00000506558 1336 ntBASIC14.51□□□□□ -0.09
CDK5Q00535 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK5Q00535 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK5Q00535 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms