Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.74■□□□□ 0.59
IRX3P78415 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.74■□□□□ 0.59
IRX3P78415 RPS2P32-201ENST00000439199 892 ntBASIC18.74■□□□□ 0.59
IRX3P78415 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.74■□□□□ 0.59
IRX3P78415 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.74■□□□□ 0.59
IRX3P78415 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.74■□□□□ 0.59
IRX3P78415 CTBP2P3-201ENST00000585629 1255 ntBASIC18.74■□□□□ 0.59
IRX3P78415 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IRX3P78415 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
IRX3P78415 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.73■□□□□ 0.59
IRX3P78415 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 TIMM17BP1-201ENST00000545713 516 ntBASIC18.73■□□□□ 0.59
IRX3P78415 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.73■□□□□ 0.59
IRX3P78415 AC074044.1-201ENST00000609673 707 ntBASIC18.73■□□□□ 0.59
IRX3P78415 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.73■□□□□ 0.59
IRX3P78415 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
IRX3P78415 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IRX3P78415 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
IRX3P78415 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 PCGF3-213ENST00000620529 1899 ntBASIC18.72■□□□□ 0.59
IRX3P78415 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
IRX3P78415 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.72■□□□□ 0.59
IRX3P78415 MIR6799-201ENST00000620297 69 ntBASIC18.72■□□□□ 0.59
IRX3P78415 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.72■□□□□ 0.59
IRX3P78415 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.72■□□□□ 0.59
IRX3P78415 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IRX3P78415 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
IRX3P78415 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms