Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC42P60953 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.77□□□□□ -0.04
CDC42P60953 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC42P60953 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDC42P60953 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC42P60953 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CDC42P60953 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42P60953 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDC42P60953 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDC42P60953 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDC42P60953 GGTLC5P-201ENST00000617623 998 ntBASIC14.77□□□□□ -0.05
CDC42P60953 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDC42P60953 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDC42P60953 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CDC42P60953 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42P60953 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 TCAF2P1-201ENST00000291129 2421 ntBASIC14.76□□□□□ -0.05
CDC42P60953 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC42P60953 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC42P60953 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.76□□□□□ -0.05
CDC42P60953 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.76□□□□□ -0.05
CDC42P60953 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CDC42P60953 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 AC087388.1-201ENST00000571370 1112 ntBASIC14.76□□□□□ -0.05
CDC42P60953 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CDC42P60953 MIR3180-1-201ENST00000580374 94 ntBASIC14.76□□□□□ -0.05
CDC42P60953 MIR3180-3-201ENST00000584616 94 ntBASIC14.76□□□□□ -0.05
CDC42P60953 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.76□□□□□ -0.05
CDC42P60953 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CDC42P60953 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.76□□□□□ -0.05
CDC42P60953 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC42P60953 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 AC012569.1-201ENST00000591191 1524 ntBASIC14.76□□□□□ -0.05
CDC42P60953 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42P60953 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42P60953 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42P60953 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms