Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CEND1P1-201ENST00000451006 455 ntBASIC14.42□□□□□ -0.1
CLRN1P58418 AC079140.1-201ENST00000508039 487 ntBASIC14.42□□□□□ -0.1
CLRN1P58418 RNA5SP410-201ENST00000516285 106 ntBASIC14.42□□□□□ -0.1
CLRN1P58418 AC005829.1-201ENST00000570002 483 ntBASIC14.42□□□□□ -0.1
CLRN1P58418 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.42□□□□□ -0.1
CLRN1P58418 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.42□□□□□ -0.1
CLRN1P58418 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.42□□□□□ -0.1
CLRN1P58418 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.42□□□□□ -0.1
CLRN1P58418 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLRN1P58418 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.42□□□□□ -0.1
CLRN1P58418 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 PAUPAR-201ENST00000630360 2965 ntBASIC14.42□□□□□ -0.1
CLRN1P58418 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.42□□□□□ -0.1
CLRN1P58418 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
CLRN1P58418 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLRN1P58418 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
CLRN1P58418 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 UXT-AS1-201ENST00000590504 1525 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.41□□□□□ -0.1
CLRN1P58418 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.41□□□□□ -0.1
CLRN1P58418 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 ADH5P3-201ENST00000433842 1137 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.41□□□□□ -0.1
CLRN1P58418 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.41□□□□□ -0.1
CLRN1P58418 KRT8P48-201ENST00000515599 1220 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 AC243562.1-201ENST00000560672 389 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 MIR3687-2-201ENST00000577708 61 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.41□□□□□ -0.1
CLRN1P58418 MIR3687-1-201ENST00000614492 61 ntBASIC14.41□□□□□ -0.1
CLRN1P58418 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.41□□□□□ -0.1
CLRN1P58418 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLRN1P58418 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLRN1P58418 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 SPCS2P4-201ENST00000436160 681 ntBASIC14.4□□□□□ -0.1
CLRN1P58418 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.4□□□□□ -0.1
CLRN1P58418 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms