Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.36□□□□□ -0.11
GFRA1P56159 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.36□□□□□ -0.11
GFRA1P56159 AC092337.1-201ENST00000568699 1129 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
GFRA1P56159 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
GFRA1P56159 AC004233.3-201ENST00000607794 1269 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 AC004790.1-201ENST00000612686 536 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.36□□□□□ -0.11
GFRA1P56159 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.36□□□□□ -0.11
GFRA1P56159 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 DOC2GP-202ENST00000514950 1163 ntBASIC14.35□□□□□ -0.11
GFRA1P56159 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.35□□□□□ -0.11
GFRA1P56159 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.35□□□□□ -0.11
GFRA1P56159 SRD5A3P1-201ENST00000603021 949 ntBASIC14.35□□□□□ -0.11
GFRA1P56159 AL450472.2-201ENST00000603663 1156 ntBASIC14.35□□□□□ -0.11
GFRA1P56159 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GFRA1P56159 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.35□□□□□ -0.11
GFRA1P56159 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GFRA1P56159 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.35□□□□□ -0.11
GFRA1P56159 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
GFRA1P56159 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 PCDHB19P-201ENST00000570871 2371 ntBASIC14.34□□□□□ -0.11
GFRA1P56159 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
GFRA1P56159 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GFRA1P56159 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.34□□□□□ -0.11
GFRA1P56159 CRB3P1-201ENST00000449338 276 ntBASIC14.34□□□□□ -0.11
GFRA1P56159 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
GFRA1P56159 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.34□□□□□ -0.11
GFRA1P56159 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms