Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.11■□□□□ 0.49
USP11P51784 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.11■□□□□ 0.49
USP11P51784 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.11■□□□□ 0.49
USP11P51784 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.11■□□□□ 0.49
USP11P51784 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 AC025048.3-201ENST00000590609 569 ntBASIC18.11■□□□□ 0.49
USP11P51784 AC005702.4-201ENST00000618393 416 ntBASIC18.11■□□□□ 0.49
USP11P51784 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
USP11P51784 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
USP11P51784 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 Z97205.2-201ENST00000564697 1639 ntBASIC18.11■□□□□ 0.49
USP11P51784 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
USP11P51784 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP11P51784 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 AC136604.1-201ENST00000418535 575 ntBASIC18.1■□□□□ 0.49
USP11P51784 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.1■□□□□ 0.49
USP11P51784 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.1■□□□□ 0.49
USP11P51784 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP11P51784 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.1■□□□□ 0.49
USP11P51784 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.1■□□□□ 0.49
USP11P51784 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.1■□□□□ 0.49
USP11P51784 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.1■□□□□ 0.49
USP11P51784 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP11P51784 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 LINC02199-201ENST00000506655 2702 ntBASIC18.1■□□□□ 0.49
USP11P51784 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP11P51784 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
USP11P51784 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP11P51784 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 AC010491.1-201ENST00000563101 2797 ntBASIC18.09■□□□□ 0.49
USP11P51784 CICP6-201ENST00000457191 2729 ntBASIC18.09■□□□□ 0.49
USP11P51784 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.09■□□□□ 0.49
USP11P51784 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 AC044860.1-202ENST00000559481 777 ntBASIC18.09■□□□□ 0.49
USP11P51784 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.09■□□□□ 0.49
USP11P51784 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 AC097359.3-201ENST00000603982 1210 ntBASIC18.09■□□□□ 0.49
USP11P51784 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 PCDHA1-201ENST00000378133 2726 ntBASIC18.09■□□□□ 0.49
USP11P51784 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.09■□□□□ 0.49
USP11P51784 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
USP11P51784 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP11P51784 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.08■□□□□ 0.49
USP11P51784 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
USP11P51784 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.08■□□□□ 0.49
USP11P51784 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.08■□□□□ 0.49
USP11P51784 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP11P51784 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms