Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCR9P51686 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCR9P51686 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.21□□□□□ -0.13
CCR9P51686 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.21□□□□□ -0.13
CCR9P51686 AL513480.1-201ENST00000451731 511 ntBASIC14.21□□□□□ -0.13
CCR9P51686 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.21□□□□□ -0.13
CCR9P51686 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.21□□□□□ -0.13
CCR9P51686 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.21□□□□□ -0.13
CCR9P51686 IFNL4P1-201ENST00000607083 540 ntBASIC14.21□□□□□ -0.13
CCR9P51686 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.21□□□□□ -0.13
CCR9P51686 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 FLJ16779-201ENST00000612722 7638 ntBASIC14.21□□□□□ -0.13
CCR9P51686 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCR9P51686 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
CCR9P51686 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.21□□□□□ -0.14
CCR9P51686 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CCR9P51686 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCR9P51686 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCR9P51686 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CCR9P51686 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 SNX18-202ENST00000343017 3140 ntBASIC14.2□□□□□ -0.14
CCR9P51686 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.2□□□□□ -0.14
CCR9P51686 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.2□□□□□ -0.14
CCR9P51686 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCR9P51686 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 KRT18P34-201ENST00000488218 1270 ntBASIC14.2□□□□□ -0.14
CCR9P51686 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.2□□□□□ -0.14
CCR9P51686 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 AC012640.2-201ENST00000561606 901 ntBASIC14.2□□□□□ -0.14
CCR9P51686 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.2□□□□□ -0.14
CCR9P51686 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCR9P51686 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCR9P51686 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.2□□□□□ -0.14
CCR9P51686 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.19□□□□□ -0.14
CCR9P51686 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.19□□□□□ -0.14
CCR9P51686 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 AP001282.1-201ENST00000531301 1499 ntBASIC14.19□□□□□ -0.14
CCR9P51686 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.19□□□□□ -0.14
CCR9P51686 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCR9P51686 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCR9P51686 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms