Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 RNA5SP412-201ENST00000516234 123 ntBASIC13.92□□□□□ -0.18
HCFC1P51610 TIMM17BP1-201ENST00000545713 516 ntBASIC13.92□□□□□ -0.18
HCFC1P51610 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HCFC1P51610 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HCFC1P51610 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.92□□□□□ -0.18
HCFC1P51610 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 KRT8P44-201ENST00000441609 1350 ntBASIC13.92□□□□□ -0.18
HCFC1P51610 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.92□□□□□ -0.18
HCFC1P51610 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.92□□□□□ -0.18
HCFC1P51610 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.92□□□□□ -0.18
HCFC1P51610 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCFC1P51610 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HCFC1P51610 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 HLA-A-202ENST00000376806 1854 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 TDH-203ENST00000531764 1110 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.91□□□□□ -0.18
HCFC1P51610 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 AL355864.2-201ENST00000447420 863 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.91□□□□□ -0.18
HCFC1P51610 ZNF767P-206ENST00000513792 565 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 DUX4L45-201ENST00000566406 1057 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.91□□□□□ -0.18
HCFC1P51610 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 INTS4P2-202ENST00000614726 2019 ntBASIC13.91□□□□□ -0.18
HCFC1P51610 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HCFC1P51610 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.91□□□□□ -0.18
HCFC1P51610 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.9□□□□□ -0.18
HCFC1P51610 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.9□□□□□ -0.18
HCFC1P51610 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.9□□□□□ -0.18
HCFC1P51610 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.9□□□□□ -0.18
HCFC1P51610 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.9□□□□□ -0.18
HCFC1P51610 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCFC1P51610 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HCFC1P51610 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms