Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.67■□□□□ 0.42
CPT1AP50416 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.67■□□□□ 0.42
CPT1AP50416 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPT1AP50416 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.67■□□□□ 0.42
CPT1AP50416 MIR4525-201ENST00000580000 75 ntBASIC17.67■□□□□ 0.42
CPT1AP50416 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.67■□□□□ 0.42
CPT1AP50416 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPT1AP50416 AC093525.8-201ENST00000624099 1342 ntBASIC17.67■□□□□ 0.42
CPT1AP50416 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.67■□□□□ 0.42
CPT1AP50416 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.67■□□□□ 0.42
CPT1AP50416 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPT1AP50416 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
CPT1AP50416 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPT1AP50416 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 VDAC1P7-201ENST00000462417 847 ntBASIC17.66■□□□□ 0.42
CPT1AP50416 AP001889.1-201ENST00000525414 633 ntBASIC17.66■□□□□ 0.42
CPT1AP50416 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.66■□□□□ 0.42
CPT1AP50416 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.66■□□□□ 0.42
CPT1AP50416 HNRNPUP1-201ENST00000554987 333 ntBASIC17.66■□□□□ 0.42
CPT1AP50416 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.66■□□□□ 0.42
CPT1AP50416 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 AC005052.1-201ENST00000625181 2492 ntBASIC17.66■□□□□ 0.42
CPT1AP50416 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPT1AP50416 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
CPT1AP50416 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPT1AP50416 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPT1AP50416 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPT1AP50416 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 FO681548.1-201ENST00000455617 1132 ntBASIC17.65■□□□□ 0.42
CPT1AP50416 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPT1AP50416 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.65■□□□□ 0.42
CPT1AP50416 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.65■□□□□ 0.42
CPT1AP50416 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPT1AP50416 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms