Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1EP49674 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1EP49674 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSNK1EP49674 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSNK1EP49674 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 AC245100.5-201ENST00000452108 331 ntBASIC15.67■□□□□ 0.1
CSNK1EP49674 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 FAM8A2P-201ENST00000528813 1142 ntBASIC15.67■□□□□ 0.1
CSNK1EP49674 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.67■□□□□ 0.1
CSNK1EP49674 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1EP49674 BRI3BPP1-201ENST00000594224 787 ntBASIC15.67■□□□□ 0.1
CSNK1EP49674 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1EP49674 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1EP49674 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.67■□□□□ 0.1
CSNK1EP49674 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1EP49674 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.66■□□□□ 0.1
CSNK1EP49674 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 KRT18P64-201ENST00000434946 1219 ntBASIC15.66■□□□□ 0.1
CSNK1EP49674 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.66■□□□□ 0.1
CSNK1EP49674 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.66■□□□□ 0.1
CSNK1EP49674 AL583810.1-201ENST00000553344 1045 ntBASIC15.66■□□□□ 0.1
CSNK1EP49674 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.66■□□□□ 0.1
CSNK1EP49674 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 RN7SL219P-201ENST00000582872 296 ntBASIC15.66■□□□□ 0.1
CSNK1EP49674 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1EP49674 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CSNK1EP49674 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CSNK1EP49674 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1EP49674 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1EP49674 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 AC011270.2-201ENST00000624293 2550 ntBASIC15.65■□□□□ 0.1
CSNK1EP49674 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1EP49674 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1EP49674 AC005052.1-201ENST00000625181 2492 ntBASIC15.65■□□□□ 0.1
CSNK1EP49674 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1EP49674 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms