Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BRCC3P46736 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
BRCC3P46736 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
BRCC3P46736 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 REXO1L1P-202ENST00000608646 1974 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCC3P46736 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BRCC3P46736 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCC3P46736 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRCC3P46736 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.02■□□□□ 0.32
BRCC3P46736 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
BRCC3P46736 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCC3P46736 KRT18P64-201ENST00000434946 1219 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 RPL13P2-201ENST00000440687 659 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
BRCC3P46736 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.02■□□□□ 0.32
BRCC3P46736 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.02■□□□□ 0.32
BRCC3P46736 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.02■□□□□ 0.32
BRCC3P46736 AC132938.2-201ENST00000579188 680 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 AC093726.1-201ENST00000608064 963 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 AC099568.2-201ENST00000609194 695 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 AL591163.1-201ENST00000641757 987 ntBASIC17.02■□□□□ 0.32
BRCC3P46736 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BRCC3P46736 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BRCC3P46736 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRCC3P46736 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCC3P46736 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BRCC3P46736 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 AC244107.1-201ENST00000442033 332 ntBASIC17.01■□□□□ 0.31
BRCC3P46736 PHKG1P2-201ENST00000457537 863 ntBASIC17.01■□□□□ 0.31
BRCC3P46736 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.01■□□□□ 0.31
BRCC3P46736 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.01■□□□□ 0.31
BRCC3P46736 RARRES2P5-201ENST00000564013 466 ntBASIC17.01■□□□□ 0.31
BRCC3P46736 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BRCC3P46736 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCC3P46736 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BRCC3P46736 AC018892.3-201ENST00000623986 2499 ntBASIC17.01■□□□□ 0.31
BRCC3P46736 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17■□□□□ 0.31
BRCC3P46736 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 CLK3P2-201ENST00000427566 1453 ntBASIC17■□□□□ 0.31
BRCC3P46736 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BRCC3P46736 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRCC3P46736 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms