Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SSR1P43307 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
SSR1P43307 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.21■□□□□ 0.35
SSR1P43307 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSR1P43307 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.21■□□□□ 0.35
SSR1P43307 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSR1P43307 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SSR1P43307 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSR1P43307 U82695.1-201ENST00000635752 1889 ntBASIC17.2■□□□□ 0.34
SSR1P43307 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SSR1P43307 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SSR1P43307 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.2■□□□□ 0.34
SSR1P43307 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SSR1P43307 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.2■□□□□ 0.34
SSR1P43307 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.2■□□□□ 0.34
SSR1P43307 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 RHOQP3-201ENST00000437982 621 ntBASIC17.2■□□□□ 0.34
SSR1P43307 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.2■□□□□ 0.34
SSR1P43307 AL009183.1-201ENST00000603760 355 ntBASIC17.2■□□□□ 0.34
SSR1P43307 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SSR1P43307 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SSR1P43307 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 IL9RP2-201ENST00000423948 1312 ntBASIC17.2■□□□□ 0.34
SSR1P43307 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSR1P43307 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms