Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.84□□□□□ -0.19
CD40P25942 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40P25942 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40P25942 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CD40P25942 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CD40P25942 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CD40P25942 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.83□□□□□ -0.19
CD40P25942 BNIP3P1-202ENST00000550043 1585 ntBASIC13.83□□□□□ -0.19
CD40P25942 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.83□□□□□ -0.19
CD40P25942 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.83□□□□□ -0.19
CD40P25942 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40P25942 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40P25942 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.83□□□□□ -0.2
CD40P25942 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 DFFBP1-201ENST00000433250 979 ntBASIC13.83□□□□□ -0.2
CD40P25942 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 AC093004.1-201ENST00000508850 424 ntBASIC13.83□□□□□ -0.2
CD40P25942 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40P25942 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CD40P25942 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 SRD5A3P1-201ENST00000603021 949 ntBASIC13.83□□□□□ -0.2
CD40P25942 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 AL358472.5-202ENST00000641448 1267 ntBASIC13.83□□□□□ -0.2
CD40P25942 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
CD40P25942 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CD40P25942 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD40P25942 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40P25942 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40P25942 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40P25942 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40P25942 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40P25942 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40P25942 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40P25942 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.82□□□□□ -0.2
CD40P25942 AZGP1P1-201ENST00000411909 902 ntBASIC13.82□□□□□ -0.2
CD40P25942 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40P25942 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.82□□□□□ -0.2
CD40P25942 AC005225.4-201ENST00000557330 545 ntBASIC13.82□□□□□ -0.2
CD40P25942 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40P25942 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.82□□□□□ -0.2
CD40P25942 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.82□□□□□ -0.2
CD40P25942 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40P25942 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms