Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.1■□□□□ 0.01
CHMP24386 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP24386 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP24386 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.1■□□□□ 0.01
CHMP24386 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 AC021097.1-201ENST00000607902 574 ntBASIC15.1■□□□□ 0.01
CHMP24386 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CHMP24386 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.1■□□□□ 0.01
CHMP24386 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 AKAP8P1-201ENST00000434743 1349 ntBASIC15.1■□□□□ 0.01
CHMP24386 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP24386 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP24386 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHMP24386 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHMP24386 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP24386 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.09■□□□□ 0.01
CHMP24386 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHMP24386 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHMP24386 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 AL355306.1-201ENST00000415580 579 ntBASIC15.09■□□□□ 0.01
CHMP24386 AL671277.1-201ENST00000429656 993 ntBASIC15.09■□□□□ 0.01
CHMP24386 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.09■□□□□ 0.01
CHMP24386 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 AP000344.2-201ENST00000512987 629 ntBASIC15.09■□□□□ 0.01
CHMP24386 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHMP24386 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP24386 AC099522.2-201ENST00000607001 744 ntBASIC15.09■□□□□ 0.01
CHMP24386 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP24386 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP24386 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP24386 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CHMP24386 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CHMP24386 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CHMP24386 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CHMP24386 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.08■□□□□ 0.01
CHMP24386 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP24386 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.08■□□□□ 0.01
CHMP24386 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CHMP24386 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP24386 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP24386 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP24386 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP24386 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP24386 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.08■□□□□ 0
CHMP24386 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.08■□□□□ 0
CHMP24386 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms