Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL1P22362 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 HLA-H-201ENST00000383620 1096 ntBASIC13.83□□□□□ -0.2
CCL1P22362 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL1P22362 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL1P22362 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 RNA5SP410-201ENST00000516285 106 ntBASIC13.83□□□□□ -0.2
CCL1P22362 AC243562.1-201ENST00000560672 389 ntBASIC13.83□□□□□ -0.2
CCL1P22362 AP000842.3-202ENST00000569238 1080 ntBASIC13.83□□□□□ -0.2
CCL1P22362 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL1P22362 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL1P22362 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL1P22362 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCL1P22362 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL1P22362 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL1P22362 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL1P22362 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 AC092127.1-201ENST00000567093 3455 ntBASIC13.83□□□□□ -0.2
CCL1P22362 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL1P22362 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 HYMAI-201ENST00000635591 3347 ntBASIC13.82□□□□□ -0.2
CCL1P22362 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 AL136982.4-201ENST00000437689 1740 ntBASIC13.82□□□□□ -0.2
CCL1P22362 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 AC018892.3-201ENST00000623986 2499 ntBASIC13.82□□□□□ -0.2
CCL1P22362 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 FAM58CP-201ENST00000435741 640 ntBASIC13.82□□□□□ -0.2
CCL1P22362 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
CCL1P22362 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 KRT8P23-201ENST00000560090 1207 ntBASIC13.82□□□□□ -0.2
CCL1P22362 LINC01225-203ENST00000563550 1244 ntBASIC13.82□□□□□ -0.2
CCL1P22362 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.82□□□□□ -0.2
CCL1P22362 AC120114.3-201ENST00000611923 658 ntBASIC13.82□□□□□ -0.2
CCL1P22362 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
CCL1P22362 AC084121.4-201ENST00000641598 221 ntBASIC13.82□□□□□ -0.2
CCL1P22362 AF228730.8-201ENST00000642140 221 ntBASIC13.82□□□□□ -0.2
CCL1P22362 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CCL1P22362 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
CCL1P22362 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms