Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN3P20807 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN3P20807 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 HAUS4P1-201ENST00000406739 1145 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 AL645939.2-201ENST00000427340 991 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CAPN3P20807 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 UNC93B6-202ENST00000528242 690 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 AC005829.1-201ENST00000570002 483 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.54■□□□□ 0.08
CAPN3P20807 AC239800.4-201ENST00000603712 296 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.54■□□□□ 0.08
CAPN3P20807 AC021097.1-201ENST00000607902 574 ntBASIC15.54■□□□□ 0.08
CAPN3P20807 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CAPN3P20807 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CAPN3P20807 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN3P20807 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN3P20807 AC138035.3-201ENST00000622706 2791 ntBASIC15.53■□□□□ 0.08
CAPN3P20807 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN3P20807 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CAPN3P20807 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CAPN3P20807 HMGA1P7-201ENST00000406908 502 ntBASIC15.53■□□□□ 0.08
CAPN3P20807 AC254562.1-201ENST00000417586 456 ntBASIC15.53■□□□□ 0.08
CAPN3P20807 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN3P20807 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN3P20807 MIR4515-201ENST00000584082 81 ntBASIC15.53■□□□□ 0.08
CAPN3P20807 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 AL031055.1-201ENST00000606362 631 ntBASIC15.53■□□□□ 0.08
CAPN3P20807 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN3P20807 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CAPN3P20807 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN3P20807 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN3P20807 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN3P20807 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN3P20807 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms